I think the "best" bosses would be those that grew the business, mostly managed to avoid jail, kept the peace and died of natural causes.
So in addition to those you mentioned (Accardo/Gambino/Trafficante Jr)I would include Tommy Lucchese, Carlos Marcello, Frank Costello, Luciano, and Joe Zerelli.
The worst bosses would be people like Sam Giancana, John Gotti, Nicky Scarfo, and Amuso/Casso-people that didn't know how to build business, liked killing too much or couldn't keep a low profile.